1 00:00:00,790 --> 00:00:07,320 [Music] 2 00:00:12,200 --> 00:00:09,100 [Applause] 3 00:00:13,850 --> 00:00:12,210 so I'm going to try to wrap up the 4 00:00:17,030 --> 00:00:13,860 session quickly so we can all get to 5 00:00:18,769 --> 00:00:17,040 lunch but Laurie and Pete both did a 6 00:00:21,040 --> 00:00:18,779 great job of explaining by 7 00:00:23,690 --> 00:00:21,050 electrochemical systems and they're 8 00:00:26,510 --> 00:00:23,700 especially the relevance to astrobiology 9 00:00:32,300 --> 00:00:26,520 and I'll talk about one of our systems 10 00:00:34,550 --> 00:00:32,310 so first I'd like to acknowledge my lab 11 00:00:39,140 --> 00:00:34,560 group I'm a postdoc at the Naval 12 00:00:41,000 --> 00:00:39,150 Research Lab Sara Glavine is my PI Bryan 13 00:00:43,580 --> 00:00:41,010 Eddie and Anthony Malinowski help with 14 00:00:45,680 --> 00:00:43,590 bioinformatics and Matt Yates and Lonnie 15 00:00:46,880 --> 00:00:45,690 tender are electro chemists and so 16 00:00:49,910 --> 00:00:46,890 there's a lot of us that have come 17 00:00:53,840 --> 00:00:49,920 together to characterize the system I'll 18 00:00:56,959 --> 00:00:53,850 talk to you about today and so again we 19 00:00:58,700 --> 00:00:56,969 heard from both Lori and Pete about bio 20 00:01:01,099 --> 00:00:58,710 electrochemical systems and I really 21 00:01:03,139 --> 00:01:01,109 like what Pete had to say that all life 22 00:01:06,290 --> 00:01:03,149 is sort of a bio electrochemical system 23 00:01:09,050 --> 00:01:06,300 in the environment but again we're 24 00:01:12,800 --> 00:01:09,060 looking at bio electrochemical systems 25 00:01:14,840 --> 00:01:12,810 basically as a way to culture organisms 26 00:01:18,020 --> 00:01:14,850 or communities and we can look directly 27 00:01:20,149 --> 00:01:18,030 at electron transfer and see what energy 28 00:01:24,380 --> 00:01:20,159 is required and what energy is moving 29 00:01:26,510 --> 00:01:24,390 through the system and so here I have a 30 00:01:29,270 --> 00:01:26,520 benthic microbial fuel cell which is 31 00:01:32,030 --> 00:01:29,280 benthic is at the bottom of the ocean or 32 00:01:34,399 --> 00:01:32,040 a river and typically we have one 33 00:01:36,280 --> 00:01:34,409 electrode that's in the sediment and at 34 00:01:38,230 --> 00:01:36,290 this electrode micro rna's 35 00:01:41,080 --> 00:01:38,240 microorganisms are capable of oxidizing 36 00:01:45,200 --> 00:01:41,090 organics and those electrons are moved 37 00:01:47,330 --> 00:01:45,210 pushed onto that electrode the electrons 38 00:01:50,080 --> 00:01:47,340 can move through the system to another 39 00:01:53,480 --> 00:01:50,090 electrode in the overlying seawater and 40 00:01:56,389 --> 00:01:53,490 here other microorganisms are capable of 41 00:01:59,560 --> 00:01:56,399 use utilizing those electrons for 42 00:02:04,310 --> 00:01:59,570 reduction reactions and so there's 43 00:02:07,219 --> 00:02:04,320 generally two types of BES where you 44 00:02:09,139 --> 00:02:07,229 keep either an electrode at an anodic 45 00:02:11,820 --> 00:02:09,149 potential and you have electricity 46 00:02:15,360 --> 00:02:11,830 production or you keep the electrode at 47 00:02:17,730 --> 00:02:15,370 a cathodic potential and you use the 48 00:02:22,770 --> 00:02:17,740 microorganisms use that those electrons 49 00:02:24,630 --> 00:02:22,780 for reduction reactions and so again as 50 00:02:27,620 --> 00:02:24,640 Pete and Laurie showed us there's many 51 00:02:30,510 --> 00:02:27,630 applications of BES with relevance to 52 00:02:32,730 --> 00:02:30,520 astrobiology specifically if we want to 53 00:02:36,360 --> 00:02:32,740 look at how electron transfer is working 54 00:02:39,990 --> 00:02:36,370 in unique communities and so Laurie 55 00:02:43,770 --> 00:02:40,000 showed some hydrothermal vents there's 56 00:02:46,890 --> 00:02:43,780 also some applications of microbial fuel 57 00:02:49,800 --> 00:02:46,900 cells to life detection in this case 58 00:02:53,070 --> 00:02:49,810 current production would be correlated 59 00:02:57,630 --> 00:02:53,080 with photo or chemo with autotrophic 60 00:03:00,480 --> 00:02:57,640 microorganisms BES in general have a lot 61 00:03:02,520 --> 00:03:00,490 of use in wastewater treatment nutrient 62 00:03:04,640 --> 00:03:02,530 recycling and so they're also looked at 63 00:03:07,860 --> 00:03:04,650 as potential life support systems for 64 00:03:11,700 --> 00:03:07,870 both the ISS and for long-term space 65 00:03:13,950 --> 00:03:11,710 travel and so the system I'm going to 66 00:03:15,680 --> 00:03:13,960 talk to you about today is a unique 67 00:03:18,770 --> 00:03:15,690 system where we were trying to make a 68 00:03:21,660 --> 00:03:18,780 rechargeable battery so many my 69 00:03:23,790 --> 00:03:21,670 microbial electrochemical systems can be 70 00:03:26,640 --> 00:03:23,800 thought of as batteries as Laurie barge 71 00:03:29,490 --> 00:03:26,650 mentioned but what we wanted to do here 72 00:03:33,120 --> 00:03:29,500 instead of having a set anode and a set 73 00:03:36,120 --> 00:03:33,130 cathode in the ocean sediment and in the 74 00:03:39,150 --> 00:03:36,130 overlying sea water and having power 75 00:03:41,930 --> 00:03:39,160 production from oxidation of organics at 76 00:03:45,540 --> 00:03:41,940 the anode we wanted to see if we could 77 00:03:48,750 --> 00:03:45,550 basically switch this anode to a cathode 78 00:03:51,840 --> 00:03:48,760 and push power into the system we wanted 79 00:03:54,470 --> 00:03:51,850 to be able to push power into the 80 00:03:57,660 --> 00:03:54,480 sediment have organisms utilize those 81 00:03:59,400 --> 00:03:57,670 electrons and store that charge in 82 00:04:02,180 --> 00:03:59,410 charge carrying molecules in the 83 00:04:06,020 --> 00:04:02,190 sediment we'd be able to use this later 84 00:04:13,860 --> 00:04:08,790 fueling instruments at the bottom of the 85 00:04:16,409 --> 00:04:13,870 ocean or submersibles for example and so 86 00:04:19,700 --> 00:04:16,419 what we did is we took an initial 87 00:04:22,920 --> 00:04:19,710 inoculum from a river sediment and we 88 00:04:24,820 --> 00:04:22,930 put it we brought it into a lab scale 89 00:04:27,429 --> 00:04:24,830 environment and we used a typical 90 00:04:29,469 --> 00:04:27,439 age cell by electrochemical reactor and 91 00:04:31,390 --> 00:04:29,479 so here we don't have a sediment 92 00:04:33,640 --> 00:04:31,400 electrode but we have a counter 93 00:04:35,350 --> 00:04:33,650 electrode and a working electrode the 94 00:04:36,999 --> 00:04:35,360 working electrode is the one that we're 95 00:04:40,149 --> 00:04:37,009 going to switch the potential back and 96 00:04:42,879 --> 00:04:40,159 forth to see if we can both produce 97 00:04:46,179 --> 00:04:42,889 power and consume power depending on our 98 00:04:48,610 --> 00:04:46,189 needs and so our NOC um was a river 99 00:04:51,640 --> 00:04:48,620 sediment we used anaerobic artificial 100 00:04:53,469 --> 00:04:51,650 seawater as a culture medium and the 101 00:04:56,890 --> 00:04:53,479 working electrode was a piece of carbon 102 00:04:58,869 --> 00:04:56,900 cloth and basically we alternated the 103 00:05:01,200 --> 00:04:58,879 the potential of this working electrode 104 00:05:03,040 --> 00:05:01,210 from operating at a cathode where 105 00:05:05,350 --> 00:05:03,050 electrons are available to the 106 00:05:08,140 --> 00:05:05,360 microorganisms to operating as an anode 107 00:05:14,469 --> 00:05:08,150 where the electrode operates as an 108 00:05:18,010 --> 00:05:14,479 electron acceptor we did oopsie we used 109 00:05:21,249 --> 00:05:18,020 a twenty-minute charge/discharge cycle 110 00:05:23,200 --> 00:05:21,259 and so every 10 minutes the electrode 111 00:05:26,290 --> 00:05:23,210 potential would switch on the working 112 00:05:29,469 --> 00:05:26,300 electrode we also covered the reactors 113 00:05:32,740 --> 00:05:29,479 so that we could harvest or enrich for 114 00:05:35,200 --> 00:05:32,750 non photosynthetic organisms and so on 115 00:05:37,540 --> 00:05:35,210 this graph on the right its current 116 00:05:39,279 --> 00:05:37,550 density over time and basically at bolt 117 00:05:41,559 --> 00:05:39,289 when the electrode is operating at 118 00:05:45,579 --> 00:05:41,569 either potential a current is generated 119 00:05:48,309 --> 00:05:45,589 and as you can see around 10 days we 120 00:05:51,010 --> 00:05:48,319 start to see this symmetric increase and 121 00:05:53,529 --> 00:05:51,020 decrease in current and each data point 122 00:05:56,379 --> 00:05:53,539 is representative of 1 10 minute cycle 123 00:05:58,390 --> 00:05:56,389 and so every 10 minutes again this cycle 124 00:06:00,969 --> 00:05:58,400 is switching between a notic current and 125 00:06:04,029 --> 00:06:00,979 cathodic current and so this symmetric 126 00:06:06,760 --> 00:06:04,039 increase in both currents suggests that 127 00:06:08,980 --> 00:06:06,770 the same pathway or biochemical reaction 128 00:06:12,790 --> 00:06:08,990 is occurring to allow this reversibility 129 00:06:14,379 --> 00:06:12,800 of the system so what we wanted to 130 00:06:17,260 --> 00:06:14,389 figure out who's there and what are they 131 00:06:19,420 --> 00:06:17,270 doing we initially inoculated from a 132 00:06:21,219 --> 00:06:19,430 river sediment and so it's just a 133 00:06:25,869 --> 00:06:21,229 bacterial community that's been enriched 134 00:06:28,240 --> 00:06:25,879 for this reversibility so we did first a 135 00:06:31,269 --> 00:06:28,250 met a genomics analysis we retrieved 136 00:06:34,899 --> 00:06:31,279 initially 135 bins which could be 137 00:06:37,360 --> 00:06:34,909 potentially 135 different organisms only 138 00:06:38,800 --> 00:06:37,370 58 or those bins have at least 80% 139 00:06:41,020 --> 00:06:38,810 completeness 140 00:06:43,150 --> 00:06:41,030 there's at least 16 bins that are make 141 00:06:45,760 --> 00:06:43,160 up at least 1% relative abundance in the 142 00:06:49,210 --> 00:06:45,770 community and 10 of these bins are at 143 00:06:51,370 --> 00:06:49,220 least 92% complete 5 bins have at least 144 00:06:55,720 --> 00:06:51,380 relative have a relative abundance at 145 00:06:58,960 --> 00:06:55,730 least 6% and of these 5 2 bins are Delta 146 00:07:01,150 --> 00:06:58,970 proteobacteria and so for a bes this 147 00:07:02,620 --> 00:07:01,160 indicates relatively high diversity and 148 00:07:08,290 --> 00:07:02,630 the presence of sulfate-reducing 149 00:07:11,650 --> 00:07:08,300 bacteria and so in our metagenomics 150 00:07:15,340 --> 00:07:11,660 analysis we were also able to assign a 151 00:07:18,100 --> 00:07:15,350 taxonomy these are our what we're 152 00:07:20,800 --> 00:07:18,110 confident in assigning but you'll see 153 00:07:23,430 --> 00:07:20,810 that our average abundant our most 154 00:07:27,040 --> 00:07:23,440 abundant organisms about 22% abundant 155 00:07:30,310 --> 00:07:27,050 sorry across the 6 replicates and this 156 00:07:33,070 --> 00:07:30,320 maps to a sulfate-reducing the solver 157 00:07:37,060 --> 00:07:33,080 Occulus bar CI the next eight bins 158 00:07:39,310 --> 00:07:37,070 account for about 66 percent of the 159 00:07:41,920 --> 00:07:39,320 total abundance of the community and 160 00:07:45,820 --> 00:07:41,930 you'll also notice that i included two 161 00:07:47,710 --> 00:07:45,830 bins with very low abundance but you'll 162 00:07:51,159 --> 00:07:47,720 see that we have another sulfate reducer 163 00:07:57,100 --> 00:07:51,169 and two other possible sulfate reducers 164 00:08:00,219 --> 00:07:57,110 and so now if we switch to the activity 165 00:08:02,230 --> 00:08:00,229 looking at our meta transcriptomics the 166 00:08:04,300 --> 00:08:02,240 reason I included those two very low 167 00:08:07,450 --> 00:08:04,310 abundant been low abundance bins is 168 00:08:09,969 --> 00:08:07,460 because bin 127 is actually our most 169 00:08:13,719 --> 00:08:09,979 active bin and so this maps to the 170 00:08:17,350 --> 00:08:13,729 sulfur over bo alkali Phyllis and so it 171 00:08:20,920 --> 00:08:17,360 appears that we have some sulfate 172 00:08:24,310 --> 00:08:20,930 reducing organisms at work in the 173 00:08:27,190 --> 00:08:24,320 reversible system and so I'm gonna focus 174 00:08:29,620 --> 00:08:27,200 on our two most abundant and the most 175 00:08:31,600 --> 00:08:29,630 active organisms again we have the self 176 00:08:34,719 --> 00:08:31,610 Arceus bar CI which is the most abundant 177 00:08:37,029 --> 00:08:34,729 it's a sulfate reducer amezo file and 178 00:08:39,579 --> 00:08:37,039 has been shown to oxidize for me in 179 00:08:42,180 --> 00:08:39,589 acetate to carbon dioxide via the wood 180 00:08:44,710 --> 00:08:42,190 long dull pathway our most active 181 00:08:46,930 --> 00:08:44,720 organism is also our most interesting 182 00:08:50,650 --> 00:08:46,940 organism so it's technically classified 183 00:08:51,380 --> 00:08:50,660 as a sulfate reducer but in pure culture 184 00:08:55,040 --> 00:08:51,390 in the lab 185 00:08:57,949 --> 00:08:55,050 it has been shown to oxidize sulfide 186 00:09:00,170 --> 00:08:57,959 with a high expression of sulfate 187 00:09:02,000 --> 00:09:00,180 reduction genes so this organism 188 00:09:04,759 --> 00:09:02,010 actually doesn't have any genes for 189 00:09:09,019 --> 00:09:04,769 sulphide oxidation but in culture it 190 00:09:10,460 --> 00:09:09,029 oxidizes sulphide via possibly the 191 00:09:13,220 --> 00:09:10,470 sulfate reduction pathway 192 00:09:16,790 --> 00:09:13,230 it also has genes for carbon fixation 193 00:09:19,940 --> 00:09:16,800 and it has been associated with an anode 194 00:09:24,410 --> 00:09:19,950 in a sulfide oxidizing by 195 00:09:25,579 --> 00:09:24,420 electrochemical system and so we wanted 196 00:09:27,590 --> 00:09:25,589 to look at what genes were 197 00:09:29,210 --> 00:09:27,600 differentially expressed between our two 198 00:09:31,550 --> 00:09:29,220 different potentials so when the 199 00:09:33,079 --> 00:09:31,560 electrodes operating as an anode versus 200 00:09:36,199 --> 00:09:33,089 when is operating as a cathode and 201 00:09:40,519 --> 00:09:36,209 basically I highlighted in red that the 202 00:09:43,730 --> 00:09:40,529 most highly expressed genes are a bunch 203 00:09:45,199 --> 00:09:43,740 of hetero disulfide reductases these 204 00:09:47,900 --> 00:09:45,209 were initially characterized in 205 00:09:51,850 --> 00:09:47,910 methanogens but in bacteria they're 206 00:09:55,030 --> 00:09:51,860 considered to replace the reverse 207 00:10:00,710 --> 00:09:55,040 dissimilatory sulfite reductase genes 208 00:10:03,050 --> 00:10:00,720 and so these genes are down regulated at 209 00:10:04,699 --> 00:10:03,060 a cathode and now we can sort of start 210 00:10:08,090 --> 00:10:04,709 thinking about what metabolism is 211 00:10:09,829 --> 00:10:08,100 occurring in our system but first we 212 00:10:12,319 --> 00:10:09,839 wanted to look at what genes were highly 213 00:10:14,420 --> 00:10:12,329 expressed at both conditions and so 214 00:10:18,230 --> 00:10:14,430 these genes were highly expressed both 215 00:10:22,100 --> 00:10:18,240 at an anode or at cathodic potential and 216 00:10:24,350 --> 00:10:22,110 we have the complete genes pathway for 217 00:10:27,650 --> 00:10:24,360 sulfate reduction and these genes are 218 00:10:30,470 --> 00:10:27,660 also actually correlated with our most 219 00:10:33,620 --> 00:10:30,480 active organism the sulfur Vibrio alkali 220 00:10:35,960 --> 00:10:33,630 Phyllis and so if we put all this 221 00:10:40,009 --> 00:10:35,970 together including looking through the 222 00:10:42,259 --> 00:10:40,019 literature at pure cultures of alkali 223 00:10:44,780 --> 00:10:42,269 Phylis what we think is happening is 224 00:10:49,670 --> 00:10:44,790 that when the electrode is operating as 225 00:10:51,740 --> 00:10:49,680 a cathode this is offering electrons to 226 00:10:53,300 --> 00:10:51,750 the microorganisms and we believe that 227 00:10:55,250 --> 00:10:53,310 sulfate reduction is taking place 228 00:10:57,829 --> 00:10:55,260 through the normal sulfate reduction 229 00:11:01,639 --> 00:10:57,839 pathway for which all of the genes are 230 00:11:04,340 --> 00:11:01,649 highly expressed however a tan 231 00:11:07,550 --> 00:11:04,350 we believe that sulphide oxidation is 232 00:11:10,210 --> 00:11:07,560 occurring again from our same highly 233 00:11:13,850 --> 00:11:10,220 active organism but through a proposed 234 00:11:16,759 --> 00:11:13,860 reversal of the normal sulfate reduction 235 00:11:20,150 --> 00:11:16,769 pathway and Thora pat all are the ones 236 00:11:23,090 --> 00:11:20,160 that had seen this sulfate reducer 237 00:11:25,129 --> 00:11:23,100 performing sulphide oxidation with high 238 00:11:29,600 --> 00:11:25,139 expression of the sulfate reduction 239 00:11:32,720 --> 00:11:29,610 genes and they proposed a new pathway 240 00:11:36,319 --> 00:11:32,730 for sulphide oxidation that is simply a 241 00:11:40,670 --> 00:11:36,329 reverse of the sulfite of the sulfate 242 00:11:44,180 --> 00:11:40,680 reduction pathway and so again since we 243 00:11:48,050 --> 00:11:44,190 also see our main or our main active 244 00:11:50,900 --> 00:11:48,060 organism at the anode of be ESS in other 245 00:11:54,610 --> 00:11:50,910 systems this is our current hypothesis 246 00:11:57,199 --> 00:11:54,620 and so to bring this back to 247 00:11:59,000 --> 00:11:57,209 astrobiology throughout the week we've 248 00:12:01,100 --> 00:11:59,010 heard a lot about following the energy 249 00:12:04,250 --> 00:12:01,110 sources and also a lot about what we 250 00:12:06,980 --> 00:12:04,260 don't know and so on as Laurie and Pete 251 00:12:10,699 --> 00:12:06,990 mentioned I think BES are a great way to 252 00:12:13,490 --> 00:12:10,709 culture either pure pure pure cultures 253 00:12:15,650 --> 00:12:13,500 of organisms or communities and look 254 00:12:18,769 --> 00:12:15,660 directly at electron transfer and what 255 00:12:23,030 --> 00:12:18,779 energy sources are required for those 256 00:12:24,650 --> 00:12:23,040 kinds of events and so I'll leave you 257 00:12:26,420 --> 00:12:24,660 with this slide and I'll take any 258 00:12:30,290 --> 00:12:26,430 questions if we have time or you can 259 00:12:36,320 --> 00:12:30,300 catch me on your way to lunch Thanks 260 00:12:44,000 --> 00:12:39,370 I have two questions the first did these 261 00:12:46,730 --> 00:12:44,010 reversible oxidation reduction occur 262 00:12:49,810 --> 00:12:46,740 equally in the light and the dark and 263 00:12:51,980 --> 00:12:49,820 then the second question would be 264 00:12:58,100 --> 00:12:51,990 relating back to the previous speaker in 265 00:13:01,970 --> 00:12:58,110 a comment you made how much how much can 266 00:13:03,740 --> 00:13:01,980 you store for future use and are you 267 00:13:06,200 --> 00:13:03,750 talking about the sea floor fervor for 268 00:13:08,300 --> 00:13:06,210 submersibles how it how would that 269 00:13:11,480 --> 00:13:08,310 affect the surrounding ecology of the 270 00:13:14,120 --> 00:13:11,490 sea floor so for the first question I 271 00:13:16,510 --> 00:13:14,130 don't we haven't looked at light versus 272 00:13:20,150 --> 00:13:16,520 dark we've just been looking at 273 00:13:22,040 --> 00:13:20,160 non-photosynthetic communities so i 274 00:13:24,080 --> 00:13:22,050 can't i'm unfortunately i can't answer 275 00:13:27,920 --> 00:13:24,090 that question but for the second 276 00:13:31,250 --> 00:13:27,930 question so were our initial goal was to 277 00:13:34,010 --> 00:13:31,260 try to create a localized fuel source in 278 00:13:36,980 --> 00:13:34,020 the sediment because what is often 279 00:13:39,890 --> 00:13:36,990 limiting at that point is mass transport 280 00:13:42,410 --> 00:13:39,900 of the organics to you know and 281 00:13:44,150 --> 00:13:42,420 oxidation to the electrode and so if we 282 00:13:46,150 --> 00:13:44,160 have a localized fuel source by the 283 00:13:50,930 --> 00:13:46,160 electrode where we can store these 284 00:13:53,270 --> 00:13:50,940 discharge it would be available later in 285 00:13:58,490 --> 00:13:53,280 data I haven't shown we've tried to 286 00:14:00,560 --> 00:13:58,500 increase the times time of the cycle so 287 00:14:02,960 --> 00:14:00,570 this here was just a 10 minute cycle 288 00:14:07,010 --> 00:14:02,970 back and forth we've gone up to 12 hours 289 00:14:11,890 --> 00:14:07,020 and the bacteria do not like that so we 290 00:14:16,340 --> 00:14:11,900 tried to mimic a diurnal cycle and 291 00:14:19,060 --> 00:14:16,350 basically it resulted in bacterial death 292 00:14:22,940 --> 00:14:19,070 that current was not produced and so 293 00:14:25,940 --> 00:14:22,950 this this system isn't actually in a 294 00:14:29,630 --> 00:14:25,950 river or ocean sediment we do have other 295 00:14:31,880 --> 00:14:29,640 actual systems that are in ocean 296 00:14:33,590 --> 00:14:31,890 sediment but I don't know the specific 297 00:14:35,240 --> 00:14:33,600 parameters of the that current 298 00:14:38,990 --> 00:14:35,250 generation or what their what they see 299 00:14:41,900 --> 00:14:39,000 at them but Lenny Tender is one of my 300 00:14:45,260 --> 00:14:41,910 co-authors and he has systems actually 301 00:14:50,890 --> 00:14:48,620 okay well thank you all for staying and 302 00:14:52,250 --> 00:14:50,900 have a nice lunch